BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012F05LP1|AL426393
(733 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1609 1409 0.0
3x_Contig1551 639 0.0
>3x_Contig1609
Length = 15966
Score = 1409 bits (710), Expect = 0.0
Identities = 719/724 (99%)
Strand = Plus / Minus
Query: 10 tgtttttgtccgattctcacgaagttgtgacttgagaattccaattttagctatcaggtg 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7558 tgtttttgtccgattctcacgaagttgtgacttgagaattccaattttagctatcaggtg 7499
Query: 70 cgacttggatagttactttgttccatcgaccagctgcaattgcagattcacattgcagac 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7498 cgacttggatagttactttgttccatcgaccagctgcaattgcagattcacattgcagac 7439
Query: 130 acattcatagtctttcttcaaacatgctgaacaactggctgcttttcgatcatacttctt 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7438 acattcatagtctttcttcaaacatgctgaacaactggctgcttttcgatcatacttctt 7379
Query: 190 tttacgtctttggcacatcggacttgatctcttcgggttgtttctgcttttaggcattcc 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7378 tttacgtctttggcacatcggacttgatctcttcgggttgtttctgcttttaggcattcc 7319
Query: 250 agaatagatcactcgcactcacgcacttttttcccctaataatggatcagcaaagctaat 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7318 agaatagatcactcgcactcacgcacttttttcccctaataatggatcagcaaagctaat 7259
Query: 310 caatggkcaattgctgggattcagagaaaattttacgaataccgccaggcgggaacgaac 369
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7258 caatggtcaattgctgggattcagagaaaattttacgaataccgccaggcgggaacgaac 7199
Query: 370 atgctaaaccagataaattactgcacgaataactaaaactaatcggcncacaaggcctgn 429
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 7198 atgctaaaccagataaattactgcacgaataactaaaactaatcggctcacaaggcctgt 7139
Query: 430 gtaaatatacactcgagcccatcttttcaagcgtagaacacaattcccgacaaatacttt 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7138 gtaaatatacactcgagcccatcttttcaagcgtagaacacaattcccgacaaatacttt 7079
Query: 490 atttccgaagctttcccatccaaaaattcctttacttgaaggaagaaaaggcgaaactga 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7078 atttccgaagctttcccatccaaaaattcctttacttgaaggaagaaaaggcgaaactga 7019
Query: 550 catgntgacataatcttattaaggaagcgatcctgaacgtaatggagantaaggaacaac 609
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 7018 catgttgacataatcttattaaggaagcgatcctgaacgtaatggagattaaggaacaac 6959
Query: 610 atgcggctgctatgttctgagcggtaatttgacacataacagtattgttgggtgcaatcg 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6958 atgcggctgctatgttctgagcggtaatttgacacataacagtattgttgggtgcaatcg 6899
Query: 670 acaaaccaagttatttcctacaccccggtcttctaaacgatccatgtttctgtattaata 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6898 acaaaccaagttatttcctacaccccggtcttctaaacgatccatgtttctgtattaata 6839
Query: 730 tgat 733
||||
Sbjct: 6838 tgat 6835
>3x_Contig1551
Length = 9073
Score = 639 bits (322), Expect = 0.0
Identities = 499/557 (89%), Gaps = 2/557 (0%)
Strand = Plus / Minus
Query: 10 tgtttttgtccgattct-cacgaagttgtgacttgagaattccaattttagctatcaggt 68
|||||||||| |||| | ||||||||||||| ||||||| ||||||||||||||||| |
Sbjct: 880 tgtttttgtcggatttttcacgaagttgtgatgtgagaatgccaattttagctatcagtt 821
Query: 69 gcgacttggatagttactttgttccatcgaccagctgcaattgcagattcacattgcaga 128
||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||| |||
Sbjct: 820 gcgacttggatagttgctttgttccatcgaccaactgcgattgcagattcacattgtaga 761
Query: 129 cacattcatagtctttcttcaaacatgctgaacaactggctgcttttcgatcatacttct 188
||||||||| |||| |||||||| ||||||||||||| |||||| |||||| ||||||
Sbjct: 760 tgcattcatagccttttttcaaacacgctgaacaactgggtgctttccgatcacacttct 701
Query: 189 ttttacgtctttggcacatcggacttgatctcttcgggttgtttctgcttttaggcattc 248
| ||||||||||||||||| ||| ||||||| |||| ||||||||||||||||||||||
Sbjct: 700 tcttacgtctttggcacataagacatgatctcgtcggcttgtttctgcttttaggcattc 641
Query: 249 cagaatagatcactcgcactcacgcacttttttcccctaataatggatcagcaaagctaa 308
|||||||||| |||||| ||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 640 gggaatagatcaatcgcacccacacacttttttcccctaataatgaatcagcaaagctaa 581
Query: 309 tcaatggkcaattgctgggattcagagaaaattttacgaataccgccaggcgggaacgaa 368
||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||| ||
Sbjct: 580 tcaatggtcaattgctgggaatcagagaaaactttacgaataccgccaggcgggaacaaa 521
Query: 369 catgctaaaccagataaattactgcacgaataactaaaactaatcggcncacaaggcctg 428
| |||||||||||||||| ||||| ||||||||||||||| || |||| |||||| ||||
Sbjct: 520 cctgctaaaccagataaactactgtacgaataactaaaaccaaccggctcacaagacctg 461
Query: 429 ngtaaatatacactcgagcccatcttttcaagcgtagaacacaattcccgacaaatactt 488
|||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||
Sbjct: 460 tgtaaatatacactcgagcccatcttttctggcgtagaacatcattcccgacaaatgttt 401
Query: 489 tatttccgaagctttcccatccaaaaattcc-tttacttgaaggaagaaaaggcgaaact 547
|||||||||||||||| | || |||||| || ||| |||||| ||||||||| |||||||
Sbjct: 400 tatttccgaagctttctcttcgaaaaatcccatttgcttgaaagaagaaaagacgaaact 341
Query: 548 gacatgntgacataatc 564
|||||| ||||||||||
Sbjct: 340 gacatgttgacataatc 324
Score = 99.7 bits (50), Expect = 7e-21
Identities = 113/133 (84%), Gaps = 2/133 (1%)
Strand = Plus / Minus
Query: 603 gaacaacatgcggctgctatgttctgagcggtaatttgacacataacag--tattgttgg 660
||||||||| |||| |||||||||| |||||||||||||||||||| || | ||||||
Sbjct: 276 gaacaacatacggccgctatgttctcagcggtaatttgacacataatagacttgtgttgg 217
Query: 661 gtgcaatcgacaaaccaagttatttcctacaccccggtcttctaaacgatccatgtttct 720
||||||||||||||||| ||||||| |||||||| |||| ||| ||||||| ||||
Sbjct: 216 gtgcaatcgacaaaccagtatatttccgacaccccgatctttcaaaggatccatacttct 157
Query: 721 gtattaatatgat 733
||| ||||||||
Sbjct: 156 atataaatatgat 144
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4398
Number of Sequences: 1807
Number of extensions: 4398
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 2
length of query: 733
length of database: 10,358,551
effective HSP length: 16
effective length of query: 717
effective length of database: 10,329,639
effective search space: 7406351163
effective search space used: 7406351163
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)